▼

Loading…

Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene tree (Drosophilidae)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

DB built by FlyBase

.

Gene: CG17816 FBgn0037525

.

Gene Synonyms

Location

Primary_assembly 3R: 7,855,582-7,886,733 reverse strand.

BDGP6.54:AE014297.3

About this gene

This gene has 8 transcripts (splice variants) and 13 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG17816-RG	FBtr0113203	3190	882aa	FBpp0112115	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8JQV3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
CG17816-RK	FBtr0333829	6187	770aa	FBpp0305963	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KFF3	-	-
CG17816-RE	FBtr0113202	5556	855aa	FBpp0112114	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8JQV2	-	-
CG17816-RH	FBtr0300827	2920	772aa	FBpp0290051	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86PA0	-	-
CG17816-RD	FBtr0081770	2860	772aa	FBpp0081267	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86PA0	-	-
CG17816-RI	FBtr0333827	2599	685aa	FBpp0305961	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0C4DHA8	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
CG17816-RJ	FBtr0333828	2461	639aa	FBpp0305962	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0C4DHE0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG17816-RF	FBtr0300826	1923	256aa	FBpp0290050	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JJ81 Q1RKY2	-	-

.

Summary

.

.