Histamine-gated chloride channel subunit 1
Primary_assembly 3R: 11,787,176-11,789,393 forward strand.
BDGP6.32:AE014297.3
This gene has 4 transcripts (splice variants), 90 orthologues and 21 paralogues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| HisCl1-RA | FBtr0082470 | 1758 | 426aa | FBpp0081946 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8T9R9 Q9VGI0 | NM_169429 NM_169429.4 NP_731632 NP_731632.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| HisCl1-RB | FBtr0082471 | 1711 | 422aa | FBpp0089166 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8WS32 | NM_141859 NM_141859.4 NP_650116 NP_650116.2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| HisCl1-RC | FBtr0082472 | 1707 | 233aa | FBpp0089167 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B5SUZ0 Q95T69 | NM_206474 NM_206474.3 NP_996196 NP_996196.1 | - |
| HisCl1-RD | FBtr0301826 | 1693 | 416aa | FBpp0291040 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B5SUY9 E1JII9 | NM_001170120 NM_001170120.2 NP_001163591 NP_001163591.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
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