Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Metazoan Compara
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DB built by FlyBase

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Gene: Snx3 FBgn0038065

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Description

Sorting nexin 3

Gene Synonyms

Location

Primary_assembly 3R: 12,628,031-12,630,495 forward strand.

BDGP6.32:AE014297.3

About this gene

This gene has 2 transcripts (splice variants), 130 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Snx3-RB	FBtr0082642	1860	167aa	FBpp0082111	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VG51	NM_141957.4 NM_169476 NM_169476.2 NP_650214.1 NP_731727 NP_731727.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Snx3-RA	FBtr0082641	1426	167aa	FBpp0082110	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VG51	NM_141957 NM_141957.4 NM_169476.2 NP_650214 NP_650214.1 NP_731727.2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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Gene-based displays