Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
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Genetic Variation
- Variant table
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Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: CG8907 FBgn0038466

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Gene Synonyms

Location

Primary_assembly 3R: 17,008,269-17,012,533 forward strand.

BDGP6.32:AE014297.3

About this gene

This gene has 2 transcripts (splice variants), 93 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG8907-RB	FBtr0305271	2360	732aa	FBpp0293795	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3DMM2 H9ZYQ1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG8907-RA	FBtr0083372	2368	712aa	FBpp0082815	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95TJ6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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