Summary
- Splice variants
- Transcript comparison
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Sequence
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Literature
Metazoan Compara
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DB built by FlyBase

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Gene: CG7720 FBgn0038652

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Location

Primary_assembly 3R: 18,759,236-18,795,169 reverse strand.

BDGP6.32:AE014297.3

About this gene

This gene has 6 transcripts (splice variants), 287 orthologues and 14 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG7720-RD	FBtr0301200	2758	681aa	FBpp0290418	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7K3Q2	NM_001170178.2 NM_001170179 NM_001170179.2 NM_001170180.1 NM_001300470.1 NM_142496.4 NM_169834.2 NP_001163649.1 NP_001163650 NP_001163650.1 NP_001163651.1 NP_001287399.1 NP_650753.1 NP_732375.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG7720-RE	FBtr0301201	2607	681aa	FBpp0290419	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7K3Q2	NM_001170178.2 NM_001170179.2 NM_001170180 NM_001170180.1 NM_001300470.1 NM_142496.4 NM_169834.2 NP_001163649.1 NP_001163650.1 NP_001163651 NP_001163651.1 NP_001287399.1 NP_650753.1 NP_732375.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG7720-RC	FBtr0301199	2541	681aa	FBpp0290417	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7K3Q2	NM_001170178 NM_001170178.2 NM_001170179.2 NM_001170180.1 NM_001300470.1 NM_142496.4 NM_169834.2 NP_001163649 NP_001163649.1 NP_001163650.1 NP_001163651.1 NP_001287399.1 NP_650753.1 NP_732375.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG7720-RB	FBtr0083678	2538	681aa	FBpp0083093	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7K3Q2 Q86P61	NM_001170178.2 NM_001170179.2 NM_001170180.1 NM_001300470.1 NM_142496 NM_142496.4 NM_169834.2 NP_001163649.1 NP_001163650.1 NP_001163651.1 NP_001287399.1 NP_650753 NP_650753.1 NP_732375.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG7720-RF	FBtr0339167	2471	681aa	FBpp0308311	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7K3Q2	NM_001170178.2 NM_001170179.2 NM_001170180.1 NM_001300470 NM_001300470.1 NM_142496.4 NM_169834.2 NP_001163649.1 NP_001163650.1 NP_001163651.1 NP_001287399 NP_001287399.1 NP_650753.1 NP_732375.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG7720-RA	FBtr0083679	2425	681aa	FBpp0083094	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7K3Q2	NM_001170178.2 NM_001170179.2 NM_001170180.1 NM_001300470.1 NM_142496.4 NM_169834 NM_169834.2 NP_001163649.1 NP_001163650.1 NP_001163651.1 NP_001287399.1 NP_650753.1 NP_732375 NP_732375.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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Gene-based displays