Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
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- Gene tree
- Gene gain/loss tree
- Orthologues
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Pan-taxonomic Compara
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- Orthologues
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
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Genetic Variation
- Variant table
- Variant image
- Structural variants
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DB built by FlyBase

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Gene: CG7031 FBgn0039027

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Location

Primary_assembly 3R: 22,804,291-22,807,290 forward strand.

BDGP6.32:AE014297.3

About this gene

This gene has 3 transcripts (splice variants) and 78 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG7031-RB	FBtr0339137	2597	475aa	FBpp0308282	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VCT7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG7031-RC	FBtr0345272	2594	474aa	FBpp0311449	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LHI0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG7031-RA	FBtr0084313	1796	475aa	FBpp0083706	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VCT7	-	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,

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Summary

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