Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
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Genetic Variation
- Variant table
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DB built by FlyBase

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Gene: CG5071 FBgn0039347

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Gene Synonyms

Location

Primary_assembly 3R: 25,618,414-25,621,838 forward strand.

BDGP6.32:AE014297.3

About this gene

This gene has 4 transcripts (splice variants) and 79 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG5071-RD	FBtr0392910	3425	680aa	FBpp0352252	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IMS5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG5071-RB	FBtr0084884	2266	680aa	FBpp0084258	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IH80 Q8IMS5	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG5071-RA	FBtr0084885	2202	509aa	FBpp0084259	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B6IDI3 Q5BHU6 Q8T8Y0 Q9VBP7	-	-
CG5071-RC	FBtr0304805	2199	508aa	FBpp0293345	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K7U6	-	-

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Summary

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