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Summary
- Splice variants
- Transcript comparison
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DB built by FlyBase

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Gene: FipoQ FBgn0039667

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Description

F-box involved in polyQ pathogenesis

Gene Synonyms

Location

Primary_assembly 3R: 29,494,782-29,498,923 forward strand.

BDGP6.54:AE014297.3

About this gene

This gene has 3 transcripts (splice variants), 85 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
FipoQ-RA	FBtr0085428	1910	515aa	FBpp0084796	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IGU5 Q9VAK7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
FipoQ-RB	FBtr0085427	2255	511aa	FBpp0084795	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8T0K1	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
FipoQ-RC	FBtr0333187	2132	511aa	FBpp0305389	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8T0K1	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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