Summary
- Splice variants
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Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: CG2246 FBgn0039790

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Gene Synonyms

Location

Primary_assembly 3R: 30,592,971-30,601,489 reverse strand.

BDGP6.46:AE014297.3

About this gene

This gene has 16 transcripts (splice variants), 78 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG2246-RA	FBtr0085673	1781	406aa	FBpp0085035	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VA53	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
CG2246-RF	FBtr0085677	1840	367aa	FBpp0085039	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q961V3	-	-
CG2246-RI	FBtr0302606	1737	404aa	FBpp0291762	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4JDE3	-	-
CG2246-RE	FBtr0085678	1692	386aa	FBpp0085040	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KRU0	-	-
CG2246-RJ	FBtr0302607	1680	385aa	FBpp0291763	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4JD23	-	-
CG2246-RH	FBtr0302605	1673	406aa	FBpp0291761	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VA53	-	-
CG2246-RD	FBtr0085676	1635	367aa	FBpp0085038	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q961V3	-	-
CG2246-RM	FBtr0302610	1630	367aa	FBpp0291766	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q961V3	-	-
CG2246-RB	FBtr0085675	1616	387aa	FBpp0085037	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IMI0	-	-
CG2246-RP	FBtr0335445	1602	356aa	FBpp0307424	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KHW7	-	-
CG2246-RG	FBtr0302313	1584	387aa	FBpp0291519	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IMI0	-	-
CG2246-RC	FBtr0085674	1565	386aa	FBpp0085036	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KRU0	-	-
CG2246-RO	FBtr0335444	1554	377aa	FBpp0307423	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KHF5	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
CG2246-RN	FBtr0335443	1551	376aa	FBpp0307422	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KHJ3	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
CG2246-RK	FBtr0302608	1508	367aa	FBpp0291764	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q961V3	-	-
CG2246-RL	FBtr0302609	1495	367aa	FBpp0291765	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q961V3	-	-

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Summary

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