Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: CG3939 FBgn0040396

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Location

Primary_assembly X: 3,175,018-3,176,223 forward strand.

BDGP6.32:AE014298.5

About this gene

This gene has 2 transcripts (splice variants), 106 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG3939-RA	FBtr0070508	931	135aa	FBpp0070484	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9U1K7	NM_001297908.1 NM_130692 NM_130692.4 NP_001284837.1 NP_570048 NP_570048.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
CG3939-RB	FBtr0343600	747	135aa	FBpp0310197	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q32UU6 Q32UV4 Q32UW6 Q32UX0 Q32UY2 Q32UY6 Q32UZ0 Q32V02 Q32V38 Q9U1K7	NM_001297908 NM_001297908.1 NM_130692.4 NP_001284837 NP_001284837.1 NP_570048.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1

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Summary

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Gene-based displays