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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Metazoan Compara
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- GO: Cellular component
- GO: Molecular function
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DB built by FlyBase

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Gene: Arts FBgn0042177

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Description

Artemis

Gene Synonyms

Location

Primary_assembly 3L: 16,602,851-16,608,146 forward strand.

BDGP6.54:AE014296.5

About this gene

This gene has 3 transcripts (splice variants), 68 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Arts-RC	FBtr0481626	3896	1080aa	FBpp0428408	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PFR8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Arts-RB	FBtr0331559	3694	1080aa	FBpp0303949	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PFR8	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Arts-RA	FBtr0075313	3691	1079aa	FBpp0075073	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B5RIL6 M9WT69 Q8SWQ9 Q8T094 Q9VV82	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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