Summary
- Splice variants
- Transcript comparison
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Metazoan Compara
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Pan-taxonomic Compara
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- GO: Cellular component
- GO: Molecular function
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DB built by FlyBase

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Gene: CG5938 FBgn0046247

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Location

Primary_assembly 3R: 27,274,794-27,277,418 forward strand.

BDGP6.32:AE014297.3

About this gene

This gene has 5 transcripts (splice variants) and 120 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG5938-RD	FBtr0085160	1673	168aa	FBpp0084530	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0KI06	NM_001104477.2 NM_143296.3 NM_170331.3 NM_170332.2 NM_170333 NM_170333.2 NP_001097947.2 NP_651553.2 NP_733210.1 NP_733211.1 NP_733212 NP_733212.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
CG5938-RF	FBtr0334729	1615	168aa	FBpp0306777	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0KI06	NM_001104477 NM_001104477.2 NM_143296.3 NM_170331.3 NM_170332.2 NM_170333.2 NP_001097947 NP_001097947.2 NP_651553.2 NP_733210.1 NP_733211.1 NP_733212.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
CG5938-RC	FBtr0085162	1531	168aa	FBpp0084532	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0KI06	NM_001104477.2 NM_143296 NM_143296.3 NM_170331.3 NM_170332.2 NM_170333.2 NP_001097947.2 NP_651553 NP_651553.2 NP_733210.1 NP_733211.1 NP_733212.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
CG5938-RB	FBtr0085159	1401	168aa	FBpp0084529	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0KI06	NM_001104477.2 NM_143296.3 NM_170331.3 NM_170332 NM_170332.2 NM_170333.2 NP_001097947.2 NP_651553.2 NP_733210.1 NP_733211 NP_733211.1 NP_733212.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
CG5938-RA	FBtr0085161	1255	168aa	FBpp0084531	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0KI06 Q8T015	NM_001104477.2 NM_143296.3 NM_170331 NM_170331.3 NM_170332.2 NM_170333.2 NP_001097947.2 NP_651553.2 NP_733210 NP_733210.1 NP_733211.1 NP_733212.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1

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Summary

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Gene-based displays