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DB built by FlyBase

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Gene: Pif1B FBgn0046874

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Description

PFTAIRE-interacting factor 1B

Location

Primary_assembly 3R: 8,774,286-8,801,176 reverse strand.

BDGP6.32:AE014297.3

About this gene

This gene has 5 transcripts (splice variants) and 10 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Pif1B-RD	FBtr0332504	7780	1041aa	FBpp0304780	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VHL6	NM_001031984.2 NM_001031985.1 NM_001275457.3 NM_001275458 NM_001275458.2 NM_001316570.1 NP_001027155.1 NP_001027156.1 NP_001262386.1 NP_001262387 NP_001262387.1 NP_001303499.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
Pif1B-RC	FBtr0332503	7761	1041aa	FBpp0304779	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VHL6	NM_001031984.2 NM_001031985.1 NM_001275457 NM_001275457.3 NM_001275458.2 NM_001316570.1 NP_001027155.1 NP_001027156.1 NP_001262386 NP_001262386.1 NP_001262387.1 NP_001303499.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
Pif1B-RE	FBtr0433508	7694	1041aa	FBpp0390640	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VHL6	NM_001031984.2 NM_001031985.1 NM_001275457.3 NM_001275458.2 NM_001316570 NM_001316570.1 NP_001027155.1 NP_001027156.1 NP_001262386.1 NP_001262387.1 NP_001303499 NP_001303499.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
Pif1B-RA	FBtr0091716	6324	1041aa	FBpp0099707	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VHL6	NM_001031984.2 NM_001031985 NM_001031985.1 NM_001275457.3 NM_001275458.2 NM_001316570.1 NP_001027155.1 NP_001027156 NP_001027156.1 NP_001262386.1 NP_001262387.1 NP_001303499.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
Pif1B-RB	FBtr0091717	4148	1041aa	FBpp0099708	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C4JC98 Q8WTI7 Q9VHL6 Q9Y0Z8	NM_001031984 NM_001031984.2 NM_001031985.1 NM_001275457.3 NM_001275458.2 NM_001316570.1 NP_001027155 NP_001027155.1 NP_001027156.1 NP_001262386.1 NP_001262387.1 NP_001303499.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1

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Summary

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Gene-based displays