Summary
- Splice variants
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Sequence
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Literature
Metazoan Compara
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- Gene gain/loss tree
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Pan-taxonomic Compara
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- GO: Cellular component
- GO: Biological process
- GO: Molecular function
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Genetic Variation
- Variant table
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DB built by FlyBase

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Gene: CG30015 FBgn0050015

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Location

Primary_assembly 2R: 10,839,102-10,874,771 reverse strand.

BDGP6.32:AE013599.5

About this gene

This gene has 7 transcripts (splice variants) and 41 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG30015-RC	FBtr0113356	6386	1510aa	FBpp0112268	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8DY97	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG30015-RB	FBtr0088243	6242	1462aa	FBpp0087338	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0E9C6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG30015-RE	FBtr0306393	5965	1510aa	FBpp0297485	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8DY97	-	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG30015-RG	FBtr0331939	5758	1263aa	FBpp0304272	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8T0M2 Q95U05	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG30015-RA	FBtr0088242	5525	1462aa	FBpp0087337	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0E9C6 Q6AWS1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG30015-RF	FBtr0331938	5363	1475aa	FBpp0304271	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KFA3	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG30015-RD	FBtr0113357	4432	1170aa	FBpp0112269	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8DY98	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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