Exchange factor for Arf 6
Primary_assembly 3R: 22,587,755-22,608,842 forward strand.
BDGP6.32:AE014297.3
This gene has 5 transcripts (splice variants), 141 orthologues and 6 paralogues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| Efa6-RH | FBtr0334559 | 6505 | 1601aa | FBpp0306626 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E1JIT7 | NM_001104403.2 NM_001104404.2 NM_001170220 NM_001170220.2 NM_170027.4 NM_176541.3 NP_001097873.1 NP_001097874.1 NP_001163691 NP_001163691.2 NP_732769.3 NP_788718.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| Efa6-RI | FBtr0334560 | 7641 | 1554aa | FBpp0306627 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E2QD56 | NM_176541 NM_176541.3 NP_788718 NP_788718.3 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Efa6-RG | FBtr0302187 | 6332 | 1402aa | FBpp0291397 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E2QD55 | NM_170027 NM_170027.4 NP_732769 NP_732769.3 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Efa6-RD | FBtr0113396 | 6262 | 1521aa | FBpp0112308 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A8JR81 | NM_001104404 NM_001104404.2 NP_001097874 NP_001097874.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Efa6-RC | FBtr0113395 | 5860 | 1387aa | FBpp0112307 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A8JR82 Q6IJE9 | NM_001104403 NM_001104403.2 NP_001097873 NP_001097873.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
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