Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
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Literature
Metazoan Compara
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- Gene gain/loss tree
- Orthologues
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Pan-taxonomic Compara
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- GO: Molecular function
- GO: Cellular component
- GO: Biological process
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Genetic Variation
- Variant table
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DB built by FlyBase

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Gene: CG31211 FBgn0051211

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Location

Primary_assembly 3R: 11,949,680-11,954,038 forward strand.

BDGP6.32:AE014297.3

About this gene

This gene has 3 transcripts (splice variants) and 74 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG31211-RB	FBtr0082480	2927	893aa	FBpp0081954	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86B99	NM_176464 NM_176464.2 NP_788641 NP_788641.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG31211-RC	FBtr0082481	2899	514aa	FBpp0081955	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86B98	NM_176465 NM_176465.2 NP_788642 NP_788642.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG31211-RA	FBtr0082479	2870	874aa	FBpp0081953	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VGG3	NM_141874 NM_141874.3 NP_650131 NP_650131.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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