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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Metazoan Compara
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- GO: Biological process
- GO: Cellular component
- GO: Molecular function
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DB built by FlyBase

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Gene: CG31955 FBgn0051955

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Location

Primary_assembly 2L: 3,711,881-3,713,105 reverse strand.

BDGP6.54:AE014134.6

About this gene

This gene has 4 transcripts (splice variants) and 11 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG31955-RD	FBtr0345639	900	153aa	FBpp0311703	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IQ04	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
CG31955-RC	FBtr0345543	777	153aa	FBpp0311642	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IQ04	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
CG31955-RA	FBtr0077540	661	153aa	FBpp0077229	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IQ04	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
CG31955-RB	FBtr0303782	391	63aa	FBpp0292794	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSG2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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