Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
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Genetic Variation
- Variant table
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- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
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ID History
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DB built by FlyBase

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Gene: Atg8a FBgn0052672

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Description

Autophagy-related 8a

Gene Synonyms

Location

Primary_assembly X: 10,764,878-10,768,338 reverse strand.

BDGP6.32:AE014298.5

About this gene

This gene has 3 transcripts (splice variants), 146 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Atg8a-RA	FBtr0071498	1214	121aa	FBpp0071427	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W2S2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Atg8a-RC	FBtr0346376	1183	107aa	FBpp0312070	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JEE0	-	-
Atg8a-RB	FBtr0346375	1010	96aa	FBpp0312069	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JJA8	-	-

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Summary

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