Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: CG40228 FBgn0063670

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Location

Primary_assembly 3L: 27,082,091-27,083,906 reverse strand.

BDGP6.32:AE014296.5

About this gene

This gene has 4 transcripts (splice variants), 197 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG40228-RC	FBtr0113841	1686	82aa	FBpp0112564	Gene/transcipt that contains an open reading frame (ORF).Protein coding	L7EEF9 Q8MQI6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG40228-RD	FBtr0333870	439	82aa	FBpp0306002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	L7EEF9 Q8MQI6	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG40228-RF	FBtr0333872	426	43aa	FBpp0306004	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
CG40228-RE	FBtr0333871	424	77aa	FBpp0306003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	L7ED64	-	-

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Summary

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