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Summary
- Splice variants
- Transcript comparison
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DB built by FlyBase

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Gene: TrissinR FBgn0085410

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Description

Trissin receptor

Gene Synonyms

Location

Primary_assembly 2L: 5,824,004-5,856,767 forward strand.

BDGP6.54:AE014134.6

About this gene

This gene has 4 transcripts (splice variants) and 36 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
TrissinR-RB	FBtr0112619	2826	669aa	FBpp0111531	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2TVJ4 Q9VML9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
TrissinR-RD	FBtr0330222	3637	659aa	FBpp0303255	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PC39	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
TrissinR-RE	FBtr0342612	3601	664aa	FBpp0309550	Gene/transcipt that contains an open reading frame (ORF).Protein coding	R4GRV6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
TrissinR-RC	FBtr0330221	2811	664aa	FBpp0303254	Gene/transcipt that contains an open reading frame (ORF).Protein coding	R4GRV6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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