Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
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- Gene gain/loss tree
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: CG42235 FBgn0250757

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Location

Primary_assembly 3R: 25,907,022-25,921,046 forward strand.

BDGP6.32:AE014297.3

About this gene

This gene has 5 transcripts (splice variants), 256 orthologues and 14 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG42235-RA	FBtr0290141	2561	695aa	FBpp0288581	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2VEH2 B7Z0Q5	NM_001144640 NM_001144640.2 NP_001138112 NP_001138112.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
CG42235-RE	FBtr0290138	2500	691aa	FBpp0288578	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q29QS6 Q9VBK0	NM_143190 NM_143190.4 NP_651447 NP_651447.2
CG42235-RD	FBtr0290139	2389	698aa	FBpp0288579	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1EC16 Q9VBK1	NM_143189 NM_143189.4 NP_651446 NP_651446.2
CG42235-RB	FBtr0290140	2359	695aa	FBpp0288580	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z0Q4 Q29QS5	NM_001144639 NM_001144639.3 NP_001138111 NP_001138111.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
CG42235-RC	FBtr0290137	2328	689aa	FBpp0288577	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VBK2	NM_170250 NM_170250.3 NP_733129 NP_733129.1

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Summary

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Gene-based displays