alpha Spectrin
Primary_assembly 3L: 1,778,485-1,795,328 reverse strand.
BDGP6.32:AE014296.5
This gene has 4 transcripts (splice variants), 135 orthologues and 9 paralogues.
Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|
alpha-Spec-RB | FBtr0332878 | 7721 | 2457aa | FBpp0305100 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9PGV6 | NM_001274357 NM_001274357.1 NP_001261286 NP_001261286.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, |
alpha-Spec-RC | FBtr0332879 | 8317 | 2447aa | FBpp0305101 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9PBI5 | NM_001274358 NM_001274358.1 NP_001261287 NP_001261287.1 | - |
alpha-Spec-RD | FBtr0332880 | 8251 | 2425aa | FBpp0305102 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9PDQ0 | NM_001274359 NM_001274359.1 NP_001261288 NP_001261288.1 | APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
alpha-Spec-RA | FBtr0072789 | 8221 | 2415aa | FBpp0072672 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | P13395 | NM_057391 NM_057391.4 NP_476739 NP_476739.1 | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |