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DB built by FlyBase

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Gene: CG42240 FBgn0250869

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Location

Primary_assembly X: 6,330,842-6,333,028 forward strand.

BDGP6.54:AE014298.5

About this gene

This gene has 3 transcripts (splice variants) and 39 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG42240-RB	FBtr0330208	1909	346aa	FBpp0303241	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PH63	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
CG42240-RC	FBtr0339775	2187	180aa	FBpp0308822	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7K0D1	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG42240-RA	FBtr0290308	1909	180aa	FBpp0288747	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7K0D1	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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