Summary
- Splice variants
- Transcript comparison
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Metazoan Compara
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Pan-taxonomic Compara
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- GO: Biological process
- GO: Molecular function
- GO: Cellular component
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DB built by FlyBase

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Gene: CG42489 FBgn0259992

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Location

Primary_assembly 3R: 8,653,802-8,654,766 reverse strand.

BDGP6.32:AE014297.3

About this gene

This gene has 3 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG42489-RB	FBtr0304002	511	77aa	FBpp0292971	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JIF0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG42489-RA	FBtr0300441	442	77aa	FBpp0289670	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JIF0	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG42489-RC	FBtr0310656	373	77aa	FBpp0302776	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JIF0 F3YDE5 H0RN66	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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