Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Metazoan Compara
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DB built by FlyBase

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Gene: CG42489 FBgn0259992

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Location

Primary_assembly 3R: 8,653,802-8,654,766 reverse strand.

BDGP6.32:AE014297.3

About this gene

This gene has 3 transcripts (splice variants) and 11 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG42489-RB	FBtr0304002	511	77aa	FBpp0292971	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JIF0	NM_001170081.3 NM_001202264 NM_001202264.2 NM_001275449.1 NP_001163552.1 NP_001189193 NP_001189193.1 NP_001262378.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
CG42489-RA	FBtr0300441	442	77aa	FBpp0289670	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JIF0	NM_001170081 NM_001170081.3 NM_001202264.2 NM_001275449.1 NP_001163552 NP_001163552.1 NP_001189193.1 NP_001262378.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
CG42489-RC	FBtr0310656	373	77aa	FBpp0302776	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JIF0 F3YDE5 H0RN66	NM_001170081.3 NM_001202264.2 NM_001275449 NM_001275449.1 NP_001163552.1 NP_001189193.1 NP_001262378 NP_001262378.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1

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Summary

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Gene-based displays