Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: CG42594 FBgn0260971

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Location

Primary_assembly X: 4,840,833-4,906,575 forward strand.

BDGP6.32:AE014298.5

About this gene

This gene has 3 transcripts (splice variants), 503 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG42594-RD	FBtr0345704	5127	905aa	FBpp0311748	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JJG8	NM_001169196.3 NM_001297940 NM_001297940.1 NP_001162667.1 NP_001284869 NP_001284869.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
CG42594-RA	FBtr0301749	4812	905aa	FBpp0290963	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JJG8	NM_001169196 NM_001169196.3 NM_001297940.1 NP_001162667 NP_001162667.1 NP_001284869.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
CG42594-RC	FBtr0345703	4812	1039aa	FBpp0311747	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JJG7	NM_001169197 NM_001169197.3 NP_001162668 NP_001162668.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5

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Summary

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Gene-based displays