Primary_assembly 3R: 18,929,196-18,978,088 forward strand.
BDGP6.32:AE014297.3
This gene has 4 transcripts (splice variants), 544 orthologues and 19 paralogues.
Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|
CG42613-RE | FBtr0304685 | 6672 | 1188aa | FBpp0293228 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4K760 D0IQI1 | NM_001260256 NM_001260256.1 NP_001247185 NP_001247185.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
CG42613-RF | FBtr0304686 | 5507 | 845aa | FBpp0293229 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4K686 B3DNL6 | NM_001260257 NM_001260257.2 NP_001247186 NP_001247186.1 | - |
CG42613-RG | FBtr0304687 | 4961 | 1051aa | FBpp0293230 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4K6C8 | NM_001260258 NM_001260258.1 NP_001247187 NP_001247187.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
CG42613-RH | FBtr0304688 | 4927 | 1155aa | FBpp0293231 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q961I3 Q9VE20 | NM_169844 NM_169844.4 NP_732390 NP_732390.3 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |