Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
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Genetic Variation
- Variant table
- Variant image
- Structural variants
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ID History
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DB built by FlyBase

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Gene: CG42613 FBgn0261262

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Location

Primary_assembly 3R: 18,929,196-18,978,088 forward strand.

BDGP6.32:AE014297.3

About this gene

This gene has 4 transcripts (splice variants), 466 orthologues and 19 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG42613-RE	FBtr0304685	6672	1188aa	FBpp0293228	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K760 D0IQI1	NM_001260256 NM_001260256.1 NP_001247185 NP_001247185.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
CG42613-RF	FBtr0304686	5507	845aa	FBpp0293229	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K686 B3DNL6	NM_001260257 NM_001260257.2 NP_001247186 NP_001247186.1
CG42613-RG	FBtr0304687	4961	1051aa	FBpp0293230	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K6C8	NM_001260258 NM_001260258.1 NP_001247187 NP_001247187.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
CG42613-RH	FBtr0304688	4927	1155aa	FBpp0293231	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q961I3 Q9VE20	NM_169844 NM_169844.4 NP_732390 NP_732390.3	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

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Summary

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Gene-based displays