Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: CG42690 FBgn0261580

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Location

Primary_assembly 2R: 19,944,263-19,945,877 reverse strand.

BDGP6.32:AE013599.5

About this gene

This gene has 2 transcripts (splice variants) and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG42690-RB	FBtr0347025	1281	137aa	FBpp0312449	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4JCU2	NM_001202052.2 NM_001316429 NM_001316429.1 NP_001188981.1 NP_001303358 NP_001303358.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG42690-RA	FBtr0302889	761	137aa	FBpp0292020	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4JCU2 C1C3D0	NM_001202052 NM_001202052.2 NM_001316429.1 NP_001188981 NP_001188981.1 NP_001303358.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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