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DB built by FlyBase

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Gene: Msp300 FBgn0261836

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Description

Muscle-specific protein 300 kDa

Gene Synonyms

Location

Primary_assembly 2L: 5,100,877-5,207,002 forward strand.

BDGP6.54:AE014134.6

About this gene

This gene has 11 transcripts (splice variants) and 4 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Msp300-RG	FBtr0303387	43121	13540aa	FBpp0292449	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MRJ4 Q86NN0 Q86NV2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
Msp300-RD	FBtr0303385	39327	12345aa	FBpp0292447	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MRD1	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Msp300-RL	FBtr0332405	39216	12308aa	FBpp0304678	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PC84	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Msp300-RH	FBtr0303388	37913	11986aa	FBpp0292450	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MRF5	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Msp300-RI	FBtr0303389	36339	11999aa	FBpp0292451	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MRD6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Msp300-RK	FBtr0332404	36093	11917aa	FBpp0304677	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PCM8 Q8I6B6 Q8SXA8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Msp300-RE	FBtr0303384	30030	9606aa	FBpp0292446	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSG3 Q8MSD6	-	-
Msp300-RB	FBtr0303383	25760	8382aa	FBpp0292445	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MRD4 Q6IHV0	-	-
Msp300-RJ	FBtr0332403	24228	7962aa	FBpp0304676	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PC23 Q6YDA5 Q71EB7	-	-
Msp300-RM	FBtr0332406	20943	6685aa	FBpp0304679	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PEP8 Q71JA7	-	-
Msp300-RF	FBtr0303386	2610	407aa	FBpp0292448	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8T9A8	-	-

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Summary

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