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DB built by FlyBase

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Gene: Mi-2 FBgn0262519

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Description

Mi-2

Gene Synonyms

Location

Primary_assembly 3L: 19,882,051-19,910,215 reverse strand.

BDGP6.46:AE014296.5

About this gene

This gene has 4 transcripts (splice variants), 53 orthologues and 16 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Mi-2-RB	FBtr0100394	6486	1983aa	FBpp0099808	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q59E34	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Mi-2-RC	FBtr0302046	6483	1982aa	FBpp0291256	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B1PGK4 B1PGK6 B1PGM0 B1PGM1 B1PGM7 E1JI46 O97159	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Mi-2-RD	FBtr0332152	6424	1973aa	FBpp0304462	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B1PGN0 L7S4V9 M9PIA6 M9WKL1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Mi-2-RA	FBtr0074919	6416	1982aa	FBpp0074688	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JI46 O97159	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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