axo-RG | FBtr0333592 | 7145 | 2179aa | FBpp0305769 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9PE65 Q9XYX0 | NM_001259702.1 NM_001274494 NM_001274494.1 NP_001246631.1 NP_001261423 NP_001261423.1
| A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
axo-RF | FBtr0333591 | 7662 | 2147aa | FBpp0305768 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9PBP8 Q9XYX0 | NM_001274493 NM_001274493.1 NP_001261422 NP_001261422.1
| APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
axo-RB | FBtr0302646 | 7556 | 2148aa | FBpp0291786 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9NFN0 | NM_001259701 NM_001259701.1 NP_001246630 NP_001246630.1
| APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
axo-RI | FBtr0333594 | 7256 | 2047aa | FBpp0305771 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A2RVD1 Q9VZ96 | NM_079917 NM_079917.5 NP_524656 NP_524656.5
| APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
axo-RC | FBtr0306206 | 7036 | 2179aa | FBpp0297315 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9PE65 | NM_001259702 NM_001259702.1 NM_001274494.1 NP_001246631 NP_001246631.1 NP_001261423.1
| APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
axo-RH | FBtr0333593 | 6976 | 2070aa | FBpp0305770 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9NF15 | NM_001259703.1 NM_001274495 NM_001274495.1 NP_001246632.1 NP_001261424 NP_001261424.1
| APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
axo-RD | FBtr0306207 | 6867 | 2070aa | FBpp0297316 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9NF15 | NM_001259703 NM_001259703.1 NM_001274495.1 NP_001246632 NP_001246632.1 NP_001261424.1
| APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |