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- Splice variants
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Gene: sqd FBgn0263396

Description

squid

Gene Synonyms

Location

Primary_assembly 3R: 13,634,862-13,646,304 reverse strand.

BDGP6.46:AE014297.3

About this gene

This gene has 5 transcripts (splice variants), 124 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
sqd-RB	FBtr0082855	2115	344aa	FBpp0082320	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q08473	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
sqd-RA	FBtr0082854	5551	321aa	FBpp0082319	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
sqd-RE	FBtr0309094	2844	308aa	FBpp0301102	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K6U6	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
sqd-RC	FBtr0082856	2239	308aa	FBpp0082321	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K6U6	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
sqd-RD	FBtr0082857	1983	178aa	FBpp0089309	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

Gene: sqd FBgn0263396

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Gene: sqd FBgn0263396

Summary

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