Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
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Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
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External references
Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: nAChRalpha4 FBgn0266347

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Location

Chromosome 3L: 23,206,669-23,287,448 forward strand.

BDGP6.28:AE014296.5

About this gene

This gene has 6 transcripts (splice variants), 126 orthologues and 21 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	FBtr0300118	5645	539aa	FBpp0289395	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8JNX5 Q9NFR5	NM_001104199.5 NP_001097669.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
-	FBtr0346707	5645	539aa	FBpp0312320	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0S0WNY8	NM_001316465.1 NP_001303394.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	FBtr0308330	5464	371aa	FBpp0300649	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NE13	NM_001259966.3 NM_001259967.2 NP_001246895.1 NP_001246896.1
-	FBtr0308332	2354	371aa	FBpp0300651	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NE13	NM_001259966.3 NM_001259967.2 NP_001246895.1 NP_001246896.1
-	FBtr0332872	2281	499aa	FBpp0305094	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PDC9	NM_001275305.1 NP_001262234.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	FBtr0308331	1509	384aa	FBpp0300650	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q058T0 Q95RL8	NM_080494.3 NP_536742.3

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Summary

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Gene-based displays