Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Literature
Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: nAChRalpha4 FBgn0266347

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Description

nicotinic Acetylcholine Receptor alpha4

Location

Primary_assembly 3L: 23,206,669-23,287,448 forward strand.

BDGP6.32:AE014296.5

About this gene

This gene has 6 transcripts (splice variants), 115 orthologues and 21 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
nAChRalpha4-RC	FBtr0300118	5645	539aa	FBpp0289395	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8JNX5 Q9NFR5	NM_001104199 NM_001104199.5 NP_001097669 NP_001097669.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
nAChRalpha4-RH	FBtr0346707	5645	539aa	FBpp0312320	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0S0WNY8	NM_001316465 NM_001316465.1 NP_001303394 NP_001303394.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
nAChRalpha4-RD	FBtr0308330	5464	371aa	FBpp0300649	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NE13	NM_001259966 NM_001259966.3 NM_001259967.2 NP_001246895 NP_001246895.1 NP_001246896.1
nAChRalpha4-RF	FBtr0308332	2354	371aa	FBpp0300651	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NE13	NM_001259966.3 NM_001259967 NM_001259967.2 NP_001246895.1 NP_001246896 NP_001246896.1
nAChRalpha4-RG	FBtr0332872	2281	499aa	FBpp0305094	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PDC9	NM_001275305 NM_001275305.1 NP_001262234 NP_001262234.1
nAChRalpha4-RE	FBtr0308331	1509	384aa	FBpp0300650	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q058T0 Q95RL8	NM_080494 NM_080494.3 NP_536742 NP_536742.3

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Summary

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Gene-based displays