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DB built by FlyBase

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Gene: Pak FBgn0267698

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Description

p21-activated kinase

Gene Synonyms

Location

Primary_assembly 3R: 6,350,896-6,361,614 forward strand.

BDGP6.46:AE014297.3

About this gene

This gene has 9 transcripts (splice variants), 76 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Pak-RH	FBtr0334542	5196	840aa	FBpp0306609	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z0W0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Pak-RI	FBtr0334543	4937	840aa	FBpp0306610	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z0W0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Pak-RJ	FBtr0334544	4827	704aa	FBpp0306611	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VI13	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Pak-RG	FBtr0334541	3671	840aa	FBpp0306608	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z0W0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Pak-RF	FBtr0334540	3576	840aa	FBpp0306607	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z0W0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Pak-RA	FBtr0081715	3461	704aa	FBpp0081212	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VI13	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Pak-RB	FBtr0081716	3168	704aa	FBpp0081213	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VI13	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Pak-RE	FBtr0334539	3163	704aa	FBpp0306606	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VI13	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Pak-RC	FBtr0081714	3064	704aa	FBpp0081211	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VI13	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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