LIM domain kinase 1
Primary_assembly X: 12,584,385-12,592,193 reverse strand.
BDGP6.32:AE014298.5
This gene has 5 transcripts (splice variants), 159 orthologues and 11 paralogues.
Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|
LIMK1-RC | FBtr0073660 | 5627 | 1257aa | FBpp0073493 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A650FA03 A0A650FA15 A0A650FBE4 Q8IR79 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
LIMK1-RA | FBtr0073659 | 4964 | 1235aa | FBpp0073492 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A650FA57 A0A650FA81 E1JJM7 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
LIMK1-RD | FBtr0073661 | 4814 | 1052aa | FBpp0073494 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A650FA25 A0A650FA38 C7LAB4 H5V8E7 | - | - |
LIMK1-RE | FBtr0301830 | 4520 | 1235aa | FBpp0291044 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E1JJM7 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
LIMK1-RF | FBtr0301831 | 4187 | 1043aa | FBpp0291045 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A650FA28 A0A650FA37 E1JJM8 | - | - |