Summary
- Splice variants
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DB built by FlyBase

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Gene: sbb FBgn0285917

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Description

scribbler

Gene Synonyms

Location

Primary_assembly 2R: 18,278,198-18,357,296 reverse strand.

BDGP6.46:AE013599.5

About this gene

This gene has 7 transcripts (splice variants) and 63 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
sbb-RJ	FBtr0329997	10039	2330aa	FBpp0303032	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KEU2 Q8SX80 Q8T9H1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
sbb-RD	FBtr0301547	10397	2302aa	FBpp0290762	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9N693	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
sbb-RG	FBtr0301550	9824	2312aa	FBpp0290765	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JGL0	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
sbb-RH	FBtr0301551	8128	2302aa	FBpp0290766	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9GRA9 Q9N693	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
sbb-RE	FBtr0301548	5159	929aa	FBpp0290763	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8T9H1 Q9GRA9 Q9NBL3 Q9NBW0 Q9NGW5 Q9NHQ0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
sbb-RF	FBtr0301549	4991	939aa	FBpp0290764	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1ZB51 Q9GRA9 Q9NBL3 Q9NHQ0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
sbb-RC	FBtr0086766	3080	929aa	FBpp0085945	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9NBW0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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