straw
Primary_assembly 2R: 5,413,744-5,456,095 forward strand.
BDGP6.32:AE013599.5
This gene has 5 transcripts (splice variants), 91 orthologues and 3 paralogues.
Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|
stw-RE | FBtr0299921 | 3645 | 784aa | FBpp0289199 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A1Z6F4 | NM_136326 NM_136326.3 NP_610170 NP_610170.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, |
stw-RG | FBtr0335262 | 3645 | 784aa | FBpp0307245 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4KF30 | NM_001273780 NM_001273780.1 NP_001260709 NP_001260709.1 | - |
stw-RA | FBtr0299918 | 3561 | 784aa | FBpp0289196 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q7JQF6 Q86P50 | NM_165431 NM_165431.3 NP_724412 NP_724412.1 | APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
stw-RF | FBtr0301063 | 2869 | 749aa | FBpp0290285 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A1Z6F6 Q500X6 | NM_165432 NM_165432.3 NP_724413 NP_724413.2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
stw-RD | FBtr0299920 | 2706 | 784aa | FBpp0289198 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7YZT1 | NM_001144134 NM_001144134.2 NP_001137606 NP_001137606.1 | - |