Transcript: FBtr0330643 CG42399-RC

Gene Synonyms

Location

About this transcript

This transcript has 9 exons and is annotated with 25 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG42399-RB	FBtr0301929	5305	1655aa	FBpp0291141	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B5RJI4 Q8MZ39 Q9VPK5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
CG42399-RC	FBtr0330643	5299	1653aa	FBpp0303493	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PAY4	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 5,299 bps, Translation length: 1,653 residues

Version

FBtr0330643

Type

Protein coding

Annotation Method

Feature imported from FlyBase.