Rhipicephalus sanguineus (Brown dog tick, Rsan-2018) (ASM1333969v1)

Rhipicephalus sanguineus (Brown dog tick, Rsan-2018) Assembly and Gene Annotation

About Rhipicephalus sanguineus

Rhipicephalus sanguineus, commonly called the brown dog tick, kennel tick, or pantropical dog tick, is a species of tick found worldwide, but more commonly in warmer climates. This species is unusual among ticks in that its entire lifecycle can be completed indoors.

Rhipicephalus sanguineus is one of the most important vectors of diseases in dogs worldwide

(Text from Wikipedia, the free encyclopedia [1].)

Assembly

The assembly presented is the GCA013339695v1 assembly submitted[2,3] to INSDC with the assembly accession GCA_013339695.1.

Annotation

Ensembl Metazoa displays the genes from NCBI Rhipicephalus sanguineus Annotation Release 100. Small RNA features, protein features and cross-references have been annotated by Ensembl Metazoa.

The original TIGMIC Group[2,3] annotation added as a separate "CNCB-NGDC annotation" track.

References

  1. Rhipicephalus sanguineus, (accessed January 11, 2022). Wikipedia contributors, Wikipedia, The Free Encyclopedia.

  2. TIGMIC Group, Beijing Institute of Microbiology and Epidemiology

  3. Large-Scale Comparative Analyses of Tick Genomes Elucidate Their Genetic Diversity and Vector Capacities. Jia N, Wang J, Shi W, et al. . Cell. 2020 Sep;182(5):1328-1340.e13. DOI: 10.1016/j.cell.2020.07.023. PMID: 32814014.

Statistics

Summary

AssemblyASM1333969v1, INSDC Assembly GCA_013339695.1,
Database version111.1
Golden Path Length2,365,540,030
Genebuild byNCBI
Genebuild methodImport
Data sourceTIGMIC Group, Beijing Institute of Microbiology and Epidemiology

Gene counts

Coding genes23,522
Non coding genes10,839
Small non coding genes5,205
Long non coding genes5,634
Pseudogenes1,390
Gene transcripts45,849