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Strongylocentrotus purpuratus (Spur_3.1)

About Strongylocentrotus purpuratus

The purple sea urchin, Strongylocentrotus purpuratus, belongs to the echinoderma, a sister phylum to the chordates. As well as having an important phylogenetic placement, it also has an invaluable ecological role in the marine system and is a model organism for cell and development biology.

Picture credit (Creative Commons BY 3.0): Kirt L. Onthank 2008

Taxonomy ID 7668

Data source SpBase

More information and statistics

Genome assembly: Spur_3.1

More information and statistics

Download DNA sequence (FASTA)

Convert your data to Spur_3.1 coordinates

Display your data in Ensembl Metazoa

Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

More about this genebuild

Download genes, cDNAs, ncRNA, proteins - FASTA - GFF3

Update your old Ensembl IDs

Comparative genomics

What can I find? Homologues, gene trees, and whole genome alignments across multiple species.

More about comparative analyses

Phylogenetic overview of gene families

Download alignments (EMF)

Variation

This species currently has no variation database. However you can process your own variants using the Variant Effect Predictor:

Variant Effect Predictor

About this species