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Summary
- Splice variants
- Transcript comparison
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Sequence
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Metazoan Compara
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DB built by WormBase

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Gene: rnf-5 WBGene00004381

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Description

E3 ubiquitin ligase rnf-5; RING finger protein 5; RING-type domain-containing protein [Source:NCBI gene;Acc:175532]

Location

Chromosome III: 4,164,274-4,166,845 reverse strand.

WBcel235:BX284603.4

About this gene

This gene has 4 transcripts (splice variants) and 78 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	C16C10.7a.1	988	235aa	C16C10.7a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q09463	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
-	C16C10.7b.1	938	218aa	C16C10.7b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A131MD51	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	C16C10.7c.1	354	117aa	C16C10.7c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A131MBI1	-	-
-	C16C10.7d.1	303	100aa	C16C10.7d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A131MBQ1	-	-

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Summary

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