Bombus terrestris vs Apis mellifera (DH4) Synteny results
The syntenic regions between Bombus terrestris (Bombus terrestris, Bter_1.0) and Apis mellifera (DH4) (Apis mellifera, Amel_HAv3.1) were extracted from their pairwise alignment in Ensembl Metazoa release 102. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.
No configuration parameters are available.
Statistics over 187 synteny blocks
|Genome coverage (bp)||Coding exon coverage (bp)|
Uncovered: 49,583,889 out of 248,654,244
Uncovered: 3,624,449 out of 18,548,448
|Apis mellifera (DH4)||
Uncovered: 32,382,228 out of 225,250,884
Uncovered: 2,579,590 out of 18,346,913