Apis mellifera (DH4) vs Nasonia vitripennis (AsymCx) Synteny results

The syntenic regions between Apis mellifera (DH4) (Apis mellifera, Amel_HAv3.1) and Nasonia vitripennis (AsymCx) (Nasonia vitripennis, Nvit_psr_1.1) were extracted from their pairwise alignment in Ensembl Metazoa release 102. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.

Configuration parameters

No configuration parameters are available.

Statistics over 200 synteny blocks

Genome coverage (bp) Coding exon coverage (bp)
Apis mellifera (DH4)

Uncovered: 139,777,675 out of 225,250,884
Covered: 85,473,209 out of 225,250,884

Uncovered: 14,146,266 out of 18,346,913
Covered: 4,200,647 out of 18,346,913

Nasonia vitripennis (AsymCx)

Uncovered: 205,976,788 out of 297,309,692
Covered: 91,332,904 out of 297,309,692

Uncovered: 15,209,808 out of 22,806,936
Covered: 7,597,128 out of 22,806,936