Diabrotica virgifera virgifera (Western corn rootworm, Ped12-6-A-3) (Dvir_v2.0)

Diabrotica virgifera virgifera (Western corn rootworm, Ped12-6-A-3) Assembly and Gene Annotation

About Diabrotica virgifera virgifera

The Western corn rootworm, Diabrotica virgifera virgifera, is one of the most devastating corn rootworm species in North America, especially in the midwestern corn-growing areas such as Iowa. A related species, the Northern corn rootworm, D. barberi, co-inhabits in much of the range and is fairly similar in biology.

Picture credit: Creative Commons Attribution-Share Alike 4.0 via Wikimedia Commons (Image source)

Taxonomy ID 50390

(Text from Wikipedia.)

More information General information about this species can be found in Wikipedia

Assembly

The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_003013835.1].

The total length of the assembly is 2418073815 bp contained within 87712 scaffolds. The scaffold N50 value is 489108, the scaffold L50 value is 1128. Assembly gaps span 567381616 bp. The GC% content of the assembly is 33.0%.

Annotation

Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v100. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.

Statistics

Summary

AssemblyDvir_v2.0, INSDC Assembly GCA_003013835.2,
Database version111.1
Golden Path Length2,418,073,815
Genebuild byNCBI
Genebuild methodImport
Data sourceDepartment of Entomology, University of Illinois at Urbana-Champaign

Gene counts

Coding genes20,592
Non coding genes4,502
Small non coding genes903
Long non coding genes3,599
Pseudogenes304
Gene transcripts33,280