Caenorhabditis briggsae vs Caenorhabditis elegans Synteny results
The syntenic regions between Caenorhabditis briggsae (Caenorhabditis briggsae, CB4) and Caenorhabditis elegans (Caenorhabditis elegans, WBcel235) were extracted from their pairwise alignment in Ensembl Metazoa release 91. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.
No configuration parameters are available.
Statistics over 873 synteny blocks
|Genome coverage (bp)||Coding exon coverage (bp)|
Uncovered: 10,416,945 out of 108,419,665
Uncovered: 1,027,848 out of 26,221,638
Uncovered: 12,752,803 out of 100,286,401
Uncovered: 2,406,165 out of 42,382,821