Anopheles gambiae (African malaria mosquito, PEST) vs Aedes aegypti (Yellow fever mosquito, LVP_AGWG) Synteny results

The syntenic regions between Anopheles gambiae (African malaria mosquito, PEST) (Anopheles gambiae, AgamP4) and Aedes aegypti (Yellow fever mosquito, LVP_AGWG) (Aedes aegypti, AaegL5) were extracted from their pairwise alignment in Ensembl Metazoa release 99. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.

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Statistics over 170 synteny blocks