Aplysia californica (California sea hare, F4 #8) Assembly and Gene Annotation
About Aplysia californica
The California sea hare (Aplysia californica) is a species of sea slug in the sea hare family, Aplysiidae. It is found in the Pacific Ocean, off the coast of California in the United States and northwestern Mexico.
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Taxonomy ID 6500
(Text from Wikipedia.)
More information General information about this species can be found in Wikipedia
Assembly
The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_000002075.1].
The total length of the assembly is 927310431 bp contained within 4332 scaffolds. The scaffold N50 value is 917541, the scaffold L50 value is 291. Assembly gaps span 189512944 bp. The GC% content of the assembly is 40.5%.
Annotation
Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v102. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.
Statistics
Summary
Assembly | AplCal3.0, INSDC Assembly GCA_000002075.2, |
Database version | 113.1 |
Golden Path Length | 927,310,431 |
Genebuild by | NCBI |
Genebuild method | Import |
Data source | Broad Institute |
Gene counts
Coding genes | 19,405 |
Non coding genes | 2,086 |
Small non coding genes | 654 |
Long non coding genes | 1,406 |
Misc non coding genes | 26 |
Pseudogenes | 70 |
Gene transcripts | 29,274 |