Drosophila obscura (Fruit fly, BZ-5 IFL) Assembly and Gene Annotation
About Drosophila obscura
Drosophila obscura is a very abundant European species of fruit fly from the family Drosophilidae. It has been found in most habitat types with exception of coastal areas and open heathland. Larvae can be found in the sap runs of a number of deciduous trees.
Picture credit: Creative Commons Attribution-Share Alike 4.0 via Wikimedia Commons (Image source) Taxonomy ID 7282
(Text from Wikipedia.)
More information General information about this species can be found in Wikipedia
Assembly
The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_018151105.1].
The total length of the assembly is 179834232 bp contained within 215 contigs. The contig N50 value is 3931141, the contig L50 value is 10. The GC% content of the assembly is 44.0%.
Annotation
The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_018151105.1.
Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v101. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.
Statistics
Summary
Assembly | ASM1815110v1, INSDC Assembly GCA_018151105.1, |
Database version | 113.1 |
Golden Path Length | 179,834,232 |
Genebuild by | NCBI |
Genebuild method | Import |
Data source | Stanford University |
Gene counts
Coding genes | 14,694 |
Non coding genes | 1,351 |
Small non coding genes | 505 |
Long non coding genes | 836 |
Misc non coding genes | 10 |
Pseudogenes | 203 |
Gene transcripts | 25,719 |