Haliotis rufescens (Red abalone, VD_foot) Assembly and Gene Annotation
About Haliotis rufescens
Haliotis rufescens also known as the red abalone is a species of very large edible sea snail in the family Haliotidae, the abalones, ormer shells or paua. It is distributed from British Columbia, Canada, to Baja California, Mexico. It is most common in the southern half of its range.
Picture credit: Dave Cowles (2005) image obtained from inverts.wallawalla.edu (Image source)
Taxonomy ID 6454
(Text from Wikipedia.)
More information General information about this species can be found in Wikipedia
Assembly
The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_023055435.1].
The total length of the assembly is 1334454214 bp contained within 615 scaffolds. The scaffold N50 value is 45695856, the scaffold L50 value is 11. Assembly gaps span 15400 bp. The GC% content of the assembly is 41.0%.
Annotation
Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v101. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.
Statistics
Summary
Assembly | xgHalRufe1.0.p, INSDC Assembly GCA_023055435.1, |
Database version | 113.1 |
Golden Path Length | 1,334,454,214 |
Genebuild by | NCBI |
Genebuild method | Import |
Data source | Department of Ecology and Evolutionary Biology, UCLA |
Gene counts
Coding genes | 31,171 |
Non coding genes | 11,307 |
Small non coding genes | 8,211 |
Long non coding genes | 3,095 |
Misc non coding genes | 1 |
Pseudogenes | 360 |
Gene transcripts | 70,020 |