Hyalella azteca (Amphipod, HAZT.00-mixed) Assembly and Gene Annotation
About Hyalella azteca
Hyalella azteca is a widespread and abundant species of amphipod crustacean in North America. It reaches 3–8 mm (0.12–0.31 in) long, and is found in a range of fresh and brackish waters. It feeds on algae and diatoms and is a major food of waterfowl.
Picture credit: Public domain via Wikimedia Commons (Image source)
Taxonomy ID 294128
(Text from Wikipedia.)
More information General information about this species can be found in Wikipedia
Assembly
The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_000764305.2].
The total length of the assembly is 550885727 bp contained within 18000 scaffolds. The scaffold N50 value is 215427, the scaffold L50 value is 653. Assembly gaps span 2620025 bp. The GC% content of the assembly is 38.5%.
Annotation
Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v100. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.
Statistics
Summary
Assembly | Hazt_2.0, INSDC Assembly GCA_000764305.2, |
Database version | 113.1 |
Golden Path Length | 550,885,727 |
Genebuild by | NCBI |
Genebuild method | Import |
Data source | BCM-HGSC i5k initiative (arthropods) Hyalella azteca Genome Project |
Gene counts
Coding genes | 18,608 |
Non coding genes | 1,328 |
Small non coding genes | 360 |
Long non coding genes | 968 |
Pseudogenes | 86 |
Gene transcripts | 24,453 |