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Hyalella azteca (Amphipod, HAZT.00-mixed) (Hazt_2.0)

Hyalella azteca (Amphipod, HAZT.00-mixed) Assembly and Gene Annotation

About Hyalella azteca

Hyalella azteca is a widespread and abundant species of amphipod crustacean in North America. It reaches 3–8 mm (0.12–0.31 in) long, and is found in a range of fresh and brackish waters. It feeds on algae and diatoms and is a major food of waterfowl.

Picture credit: Public domain via Wikimedia Commons (Image source)

Taxonomy ID 294128

(Text from Wikipedia.)

More information General information about this species can be found in Wikipedia

Assembly

The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_000764305.2].

The total length of the assembly is 550885727 bp contained within 18000 scaffolds. The scaffold N50 value is 215427, the scaffold L50 value is 653. Assembly gaps span 2620025 bp. The GC% content of the assembly is 38.5%.

Annotation

Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v100. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.

Statistics

Summary

AssemblyHazt_2.0, INSDC Assembly GCA_000764305.2,
Database version111.1
Golden Path Length550,885,727
Genebuild byNCBI
Genebuild methodImport
Data sourceBCM-HGSC i5k initiative (arthropods) Hyalella azteca Genome Project

Gene counts

Coding genes18,608
Non coding genes1,328
Small non coding genes360
Long non coding genes968
Pseudogenes86
Gene transcripts24,453